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1

NetLogo meets R: Linking agent-based models with a toolbox for their analysis

Jan C. Thiele, Volker Grimm

Journal:

Environmental Modelling & Software

Year:

2010

Language:

english

File:

PDF, 213 KB

english, 2010

2

A standard protocol for describing individual-based and agent-based models

Volker Grimm, Uta Berger, Finn Bastiansen, Sigrunn Eliassen, Vincent Ginot, Jarl Giske, John Goss-Custard, Tamara Grand, Simone K. Heinz, Geir Huse, Andreas Huth, Jane U. Jepsen, Christian Jørgensen,

Journal:

Ecological Modelling

Year:

2006

Language:

english

File:

PDF, 335 KB

english, 2006

3

RNetLogo: an R package for running and exploring individual-based models implemented in NetLogo

Jan C. Thiele, Winfried Kurth, Volker Grimm

Journal:

Methods in Ecology and Evolution

Year:

2012

Language:

english

File:

PDF, 7.93 MB

english, 2012

4

Ecological models supporting environmental decision making: a strategy for the future

Amelie Schmolke, Pernille Thorbek, Donald L. DeAngelis, Volker Grimm

Journal:

Trends in Ecology & Evolution

Year:

2010

Language:

english

File:

PDF, 629 KB

english, 2010

5

Next-Generation Individual-Based Models Integrate Biodiversity and Ecosystems: Yes We Can, and Yes We Must

Grimm, Volker, Ayllón, Daniel, Railsback, Steven F.

Journal:

Year:

2017

Language:

english

File:

PDF, 465 KB

english, 2017

6

The ODD protocol: A review and first update

Volker Grimm, Uta Berger, Donald L. DeAngelis, J. Gary Polhill, Jarl Giske, Steven F. Railsback

Journal:

Ecological Modelling

Year:

2010

Language:

english

File:

PDF, 298 KB

english, 2010

7

Population models in pesticide risk assessment: Lessons for assessing population-level effects, recovery, and alternative exposure scenarios from modeling a small mammal

Magnus Wang, Volker Grimm

Journal:

Environmental Toxicology and Chemistry

Year:

2010

Language:

english

File:

PDF, 330 KB

english, 2010

8

Merging validation and evaluation of ecological models to ‘evaludation’: A review of terminology and a practical approach

Augusiak, Jacqueline, Van den Brink, Paul J., Grimm, Volker

Journal:

Ecological Modelling

Year:

2014

Language:

english

File:

PDF, 972 KB

english, 2014

9

Predictive ecology: systems approaches || Pattern-oriented modelling: a 'multi-scope' for predictive systems ecology

Volker Grimm and Steven F. Railsback

Journal:

Philosophical Transactions Biological Sciences

Year:

2012

Language:

english

File:

PDF, 2.30 MB

english, 2012

10

InSTREAM-Gen: Modelling eco-evolutionary dynamics of trout populations under anthropogenic environmental change

Ayllón, Daniel, Railsback, Steven F., Vincenzi, Simone, Groeneveld, Jürgen, Almodóvar, Ana, Grimm, Volker

Journal:

Ecological Modelling

Year:

2016

Language:

english

File:

PDF, 2.55 MB

english, 2016

11

Evaluation of Spatial Audio Reproduction Schemes for Application in Hearing Aid Research

Grimm, Giso, Ewert, Stephan, Hohmann, Volker

Journal:

Acta Acustica united with Acustica

Year:

2015

Language:

english

File:

PDF, 313 KB

english, 2015

12

Do simple models lead to generality in ecology?

Evans, Matthew R., Grimm, Volker, Johst, Karin, Knuuttila, Tarja, de Langhe, Rogier, Lessells, Catherine M., Merz, Martina, O’Malley, Maureen A., Orzack, Steve H., Weisberg, Michael, Wilkinson, Darren

Journal:

Trends in Ecology & Evolution

Year:

2013

Language:

english

File:

PDF, 318 KB

english, 2013

13

Modeling tiger population and territory dynamics using an agent-based approach

Carter, Neil, Levin, Simon, Barlow, Adam, Grimm, Volker

Journal:

Ecological Modelling

Year:

2015

Language:

english

File:

PDF, 3.51 MB

english, 2015

14

Using Pattern-Oriented Modeling for Revealing Hidden Information: A Key for Reconciling Ecological Theory and Application

Thorsten Wiegand, Florian Jeltsch, Ilkka Hanski and Volker Grimm

Journal:

Year:

2003

Language:

english

File:

PDF, 2.29 MB

english, 2003

15

Pattern-oriented modelling as a novel way to verify and validate functional–structural plant models: a demonstration with the annual growth module of avocado

Wang, Ming, White, Neil, Grimm, Volker, Hofman, Helen, Doley, David, Thorp, Grant, Cribb, Bronwen, Wherritt, Ella, Han, Liqi, Wilkie, John, Hanan, Jim

Journal:

Annals of Botany

Year:

2018

Language:

english

File:

PDF, 2.85 MB

english, 2018

16

An adaptable approach to automated visual detection of plant organs with applications in grapevine breeding

Grimm, Jonatan, Herzog, Katja, Rist, Florian, Kicherer, Anna, Töpfer, Reinhard, Steinhage, Volker

Journal:

Biosystems Engineering

Year:

2019

File:

PDF, 3.79 MB

2019

17

Moving infections: individual movement decisions drive disease persistence in spatially structured landscapes

Scherer, Cédric, Radchuk, Viktoriia, Franz, Mathias, Thulke, Hans–Hermann, Lange, Martin, Grimm, Volker, Kramer–Schadt, Stephanie

Journal:

Year:

2020

Language:

english

File:

PDF, 1.03 MB

english, 2020

18

Dynamic 18 F-FDG PET- Lymphography for in Vivo Identification of Lymph Node Metastases in Murine Melanoma

Lockau, Hannah H, Neuschmelting, Volker, Ogirala, Anuja, Vilaseca, Antoni, Grimm, Jan

Journal:

Journal of Nuclear Medicine

Year:

2017

Language:

english

File:

PDF, 1.48 MB

english, 2017

19

How can we bring together empiricists and modellers in functional biodiversity research?

Jeltsch, Florian, Blaum, Niels, Brose, Ulrich, Chipperfield, Joseph D., Clough, Yann, Farwig, Nina, Geissler, Katja, Graham, Catherine H., Grimm, Volker, Hickler, Thomas, Huth, Andreas, May, Felix, Me

Journal:

Basic and Applied Ecology

Year:

2013

Language:

english

File:

PDF, 521 KB

english, 2013

20

Agricultural landscape generators for simulation models: A review of existing solutions and an outline of future directions

Langhammer, Maria, Thober, Jule, Lange, Martin, Frank, Karin, Grimm, Volker

Journal:

Ecological Modelling

Year:

2019

Language:

english

File:

PDF, 3.19 MB

english, 2019

21

Cyclic Dynamics in Simulated Plant Populations

Silke Bauer, Uta Berger, Hanno Hildenbrandt and Volker Grimm

Journal:

Proceedings Biological Sciences

Year:

2002

Language:

english

File:

PDF, 1.28 MB

english, 2002

22

A note on the Gautschi-type method for oscillatory second-order differential equations

Journal:

Numerische Mathematik

Year:

2005

Language:

english

File:

PDF, 133 KB

english, 2005

23

The Independent and Interactive Effects of Tree‐Tree Establishment Competition and Fire on Savanna Structure and Dynamics.

Calabrese, Justin M., Vazquez, Federico, López, Cristóbal, San Miguel, Maxi, Grimm, Volker

Journal:

American Naturalist

Year:

2010

Language:

english

File:

PDF, 2.90 MB

english, 2010

24

Parameter estimation for functional-structural plant models when data are scarce: using multiple patterns for rejecting unsuitable parameter sets

Wang, Ming, White, Neil, Hanan, Jim, He, Di, Wang, Enli, Cribb, Bronwen, Kriticos, Darren J, Paini, Dean, Grimm, Volker

Journal:

Annals of Botany

Year:

2020

File:

PDF, 1.09 MB

2020

25

Structural realism, emergence, and predictions in next-generation ecological modelling: Synthesis from a special issue

Grimm, Volker, Berger, Uta

Journal:

Ecological Modelling

Year:

2016

Language:

english

File:

PDF, 1.43 MB

english, 2016

26

Modelling the Role of Social Behavior in the Persistence of the Alpine Marmot Marmota marmota

Volker Grimm, Norbert Dorndorf, Fredy Frey-Roos, Christian Wissel, Tomasz Wyszomirski and Walter Arnold

Journal:

Year:

2003

Language:

english

File:

PDF, 2.14 MB

english, 2003

27

Gas Phase Modification of Superhard Carbon Coatings Deposited by Pulsed DC-Arc-Process

Werner Grimm, Volker Weihnacht

Journal:

Plasma Processes and Polymers

Year:

2009

Language:

english

File:

PDF, 353 KB

english, 2009

28

Home range dynamics and population regulation: An individual-based model of the common shrew Sorex araneus

Magnus Wang, Volker Grimm

Journal:

Ecological Modelling

Year:

2007

Language:

english

File:

PDF, 1.39 MB

english, 2007

29

Cross-disciplinary links in environmental systems science: Current state and claimed needs identified in a meta-review of process models

Ayllón, Daniel, Grimm, Volker, Attinger, Sabine, Hauhs, Michael, Simmer, Clemens, Vereecken, Harry, Lischeid, Gunnar

Journal:

Science of The Total Environment

Year:

2018

Language:

english

File:

PDF, 3.98 MB

english, 2018

30

SITUATION-BASED SURVEILLANCE: ADAPTING INVESTIGATIONS TO ACTUAL EPIDEMIC SITUATIONS

Thulke, Hans-Hermann, Eisinger, Dirk, Freuling, Conrad, Fröhlich, Andreas, Globig, Anja, Grimm, Volker, Müller, Thomas, Selhorst, Thomas, Staubach, Christoph, Zips, Stephan

Journal:

Journal of Wildlife Diseases

Year:

2009

Language:

english

File:

PDF, 359 KB

english, 2009

31

Exploring resilience with agent-based models: State of the art, knowledge gaps and recommendations for coping with multidimensionality

Egli, Lukas, Weise, Hanna, Radchuk, Viktoriia, Seppelt, Ralf, Grimm, Volker

Journal:

Ecological Complexity

Year:

2018

Language:

english

File:

PDF, 734 KB

english, 2018

32

The Conduct of In Vitro and In Vivo Drug-Drug Interaction Studies: A PhRMA Perspective

Bjornsson, Thorir D., Callaghan, John T., Einolf, Heidi J., Fischer, Volker, Gan, Lawrence, Grimm, Scott, Kao, John, King, S. Peter, Miwa, Gerald, Ni, Lan, Kumar, Gondi, McLeod, James, Obach, Scott R.

Journal:

Journal of Clinical Pharmacology

Year:

2003

Language:

english

File:

PDF, 192 KB

english, 2003

33

Wildfire, landscape diversity and the Drossel–Schwabl model

Richard D. Zinck, Karin Johst, Volker Grimm

Journal:

Ecological Modelling

Year:

2010

Language:

english

File:

PDF, 1.19 MB

english, 2010

34

Recruitment filters in a perennial grassland: the interactive roles of fire, competitors, moisture and seed availability

Julia Zimmermann, Steven I. Higgins, Volker Grimm, John Hoffmann, Tamara Münkemüller, Anja Linstädter

Journal:

Journal of Ecology

Year:

2008

Language:

english

File:

PDF, 630 KB

english, 2008

35

Neutral communities may lead to decreasing diversity-disturbance relationships: insights from a generic simulation model

Francisca Ana Soares dos Santos, Karin Johst, Volker Grimm

Journal:

Ecology Letters

Year:

2011

Language:

english

File:

PDF, 252 KB

english, 2011

36

Reconstructing spatiotemporal dynamics of Central European natural beech forests: the rule-based forest model BEFORE

Christine Rademacher, Christian Neuert, Volker Grundmann, Christian Wissel, Volker Grimm

Journal:

Forest Ecology and Management

Year:

2004

Language:

english

File:

PDF, 496 KB

english, 2004

37

Mathematical models and understanding in ecology

Journal:

Ecological Modelling

Year:

1994

Language:

english

File:

PDF, 679 KB

english, 1994

38

Modelling Persistence in Dynamic Landscapes: Lessons from a Metapopulation of the Grasshopper Bryodema tuberculata

Christian Stelter, Michael Reich, Volker Grimm and Christian Wissel

Journal:

Journal of Animal Ecology

Year:

1997

Language:

english

File:

PDF, 1.81 MB

english, 1997

39

Resolvent Krylov subspace approximation to operator functions

Journal:

BIT Numerical Mathematics

Year:

2012

Language:

english

File:

PDF, 691 KB

english, 2012

40

Error analysis of exponential integrators for oscillatory second-order differential equations

Grimm, Volker, Hochbruck, Marlis

Journal:

Journal of Physics A: Mathematical and General Physics

Year:

2006

Language:

english

File:

PDF, 238 KB

english, 2006

41

Modelling secondary succession of neotropical mangroves: Causes and consequences of growth reduction in pioneer species

Uta Berger, Moira Adams, Volker Grimm, Hanno Hildenbrandt

Journal:

Perspectives in Plant Ecology, Evolution and Systematics

Year:

2006

Language:

english

File:

PDF, 573 KB

english, 2006

42

Ten years of individual-based modelling in ecology: what have we learned and what could we learn in the future?

Journal:

Ecological Modelling

Year:

1999

Language:

english

File:

PDF, 297 KB

english, 1999

43

Recruitment Filters in a Perennial Grassland: The Interactive Roles of Fire, Competitors, Moisture and Seed Availability

Julia Zimmermann, Steven I. Higgins, Volker Grimm, John Hoffmann, Tamara Münkemüller and Anja Linstädter

Journal:

Journal of Ecology

Year:

2008

Language:

english

File:

PDF, 2.51 MB

english, 2008

44

Influence of visual cues on head and eye movements during listening tasks in multi-talker audiovisual environments with animated characters

Hendrikse, Maartje M.E., Llorach, Gerard, Grimm, Giso, Hohmann, Volker

Journal:

Speech Communication

Year:

2018

Language:

english

File:

PDF, 2.69 MB

english, 2018

45

An adaptable approach to automated visual detection of plant organs with applications in grapevine breeding

Grimm, Jonatan, Herzog, Katja, Rist, Florian, Kicherer, Anna, Töpfer, Reinhard, Steinhage, Volker

Journal:

Biosystems Engineering

Year:

2019

Language:

english

File:

PDF, 3.79 MB

english, 2019

46

Analysis for microsatellite instability and mutations of the DNA mismatch repair gene hMLH1 in familial gastric cancer

Gisela Keller, Volker Grimm, Holger Vogelsang, Petra Bischoff, James Mueller, Jörg Rüdiger Siewert, Heinz Höfler

Journal:

International Journal of Cancer

Year:

1996

Language:

english

File:

PDF, 638 KB

english, 1996

47

Eni naturwissenschaftliches Literaturkarussell. Interdisziplinäres

H. von Philipsborn, E. Gebhardt, U. Pawellek, Volker Storch, L. H. Grimme, E. Hertel

Journal:

Chemie in unserer Zeit

Year:

1993

Language:

german

File:

PDF, 551 KB

german, 1993

48

Heart Rate Variability and Major Arrhythmic Events in Patients with Idiopathic Dilated Cardiomyopathy

JÜRGEN HOFFMANN, WOLFRAM GRIMM, VOLKER MENZ, URSULA KNOP, BERNHARD MAISCH

Journal:

Pacing and Clinical Electrophysiology

Year:

1996

Language:

english

File:

PDF, 323 KB

english, 1996

49

GUTs in type IIB orientifold compactifications

Ralph Blumenhagen, Volker Braun, Thomas W. Grimm, Timo Weigand

Journal:

Nuclear Physics B

Year:

2009

Language:

english

File:

PDF, 987 KB

english, 2009

50

Clinical significance of ventricular late potentials in idiopathic dilated cardiomyopathy — A prospective study in 120 patients

Grimm, Wolfram, Menz, Volker, Hoffmann, Jürgen, Knop, Ursula, Winzenburg, Jens, Maisch, Bernhard

Journal:

Journal of the American College of Cardiology

Year:

1996

Language:

english

File:

PDF, 128 KB

english, 1996

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